Nextflow pipeline for BlobToolKit for Sanger ToL production suite
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Updated
May 23, 2024 - Nextflow
Nextflow pipeline for BlobToolKit for Sanger ToL production suite
A pipeline to identify (and remove) certain sequences from raw genomic data. Default taxa to identify (and remove) are Homo and Homo sapiens. Removal is optional.
MIST: a metagenomic intra-species typing tool.
🧹🦷 aKmerBroom: Ancient oral DNA decontamination using Bloom filters on k-mer sets
Maintained elsewhere. See README.
A python implementation of the decontam R package for ASV filtering.
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