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deseq2
Here are 7 public repositories matching this topic...
RNA-seq workflow using STAR and DESeq2
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Updated
Jun 5, 2024 - Python
Perform differential analysis from FastQ files with Salmon, tximport, and DESeq2
reproducible-research
bioinformatics-pipeline
deseq2
salmon
differential-expression
snakemake-workflows
tximport
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Updated
Aug 18, 2021 - Python
Workflow to simulate an RNA-seq reads and perform DE-analysis
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Updated
Apr 29, 2021 - Python
Iteratively randomly pooling scRNA-seq expressing a given gene from different numbers of cells and running DESeq2 with fdrtools correction to determine how many times which genes come out as enriched with said gene
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Updated
Nov 9, 2018 - Python
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