Reproducible analyses for manuscript "CBEA: Competitive Balances for Taxonomic Enrichment Analysis"
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Updated
May 9, 2022 - R
Reproducible analyses for manuscript "CBEA: Competitive Balances for Taxonomic Enrichment Analysis"
miRinGO: Prediction of GO terms indirectly targeted by human microRNAs
Simple (effin') Enrichment Analysis in R
Curated list of analysis pipelines for biological & clinical interpretation of data-driven findings
A shiny app to perform pathway, drug, brain cell type and brain region (based on the Allen Brain Atlas data) enrichment and visualize the results.
TCR Enrichment Analysis (TEA) Webtool
An R package for RNAseq differential expression analysis and visualization, in an easy and reproducible way.
Enrichment analysis of Chromosomal Locations with functional biological processes (e.g. Gene Ontology Terms, KEGG Pathways, Transcription Factors), taking into account the TADs that they correspond to.
topOnto - An R package for generically enabled ontology enrichment analysis
Working Demo on GO Enrichment Analysis using topGO, clusterProfiler and Enrichr/enrichR. Visit repo website for HTML output
Scripts to perform gene set enrichment analysis (GSEA)
An Rpackage to identify cells membrane marker genes from bulkRNA sequencing data
An R package for analysis of gene expression matrix with differential expression analysis, enrichment analysis and correlation analysis.
R package for performing enrichment analysis for microbiome relative abundance data using the CBEA approach.
metabolic pathway modeling based on gene expression
Code for representing Gene Ontology Enrichment Analysis as a circular barplot.
As part of the DRPPM-PATH-SURVEIOR family, this R Shiny app aims to perform GSEA with a pre-ranked set of genes determined by hazard ratio
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