A modified FSL version for use with Slurm
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Updated
Mar 14, 2018 - Shell
A modified FSL version for use with Slurm
Reproduce BRATS preprocessing for a given patient (needed: 4 modalities T1, T2, T1c and FLAIR, optional: segmentation).
A simple script to deface (with use of fsl_deface) multiple T1/T2-weighetned files prepared according to the BIDS standard.
General utility scripts, documentation, and analysis tutorials for Smith Lab.
atlasBREX: Automated averaged template-derived brain extraction in animal MRI
Code snippets for preprocessing DTI/MRI neuroimaging data
Explore the neural basis of cognitive control with this repository's in-depth analysis of the Flanker Dataset using fMRI. Using bash scripting to streamline preprocessing and ROI analysis, while incorporating R scripts to explore brain region activity during the task.
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