Simple bacterial assembly and annotation pipeline
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Updated
May 6, 2019 - Nextflow
Simple bacterial assembly and annotation pipeline
Assembly and intrahost / low-frequency variant calling for viral samples
De novo assembly pipeline for 10X linked-reads using Supernova
UNDER CONSTRUCTION: Hybrid genome assembly pipeline using a combination of long and short sequencing reads
Nextflow wrapper for the dragonflye assembler, with additional QC
Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads
Pipelines for the production of Treeval data
Nextflow pipeline to assemble genomes from nanopore reads.
Pipeline for the identification of (coding) gene structures in draft genomes.
Pipeline for performing routine genome assembly
Simple bacterial assembly and annotation pipeline
Nextflow-powered Dragonflye Pipeline for Assembling Genomes from Nanopore and Illumina Reads
Implementation of ToL genome assembly workflows
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