Experimental version of the MSstats package
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Updated
May 14, 2021 - R
Experimental version of the MSstats package
A tool for RNA mass spectrometry
Extra (example) functions for using the proteinDiscover R package
Removing unwanted variation in mass spectrometry data with missing values
Analysis of AP-MS data
LABLASTER: Laser Ablation mass spectrometry BLASt Through Endpoint in R
R Package that enables the display of protein information
R package which contains a number of utilities for mass spectrometry
Process, visualise and analyze sets of GC/LC-MS based data
Convert Mass Spectrometry Files using msconvert, singularity and SLURM
Scripts and Pipelines for Proteomics are computational utilities for single-cell proteomics by mass spectrometry. The code is distributed by an MIT license.
R/DukeProteomicsSuite: A collection of Proteomic Energetic Methods designed to work as a pipeline taking MS ProteomeDiscoverer (v. 2.3) output (TMT10plex) directly into publication quality figures
R/Bioconductor package for limit of blanc (LOB) and limit of detection (LOD) estimation
Example data for the `topdown` R package
It assigns the phosphorylation site in protein
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