My solutions for the project of "An Intro to Bioinformatics" - Sharif University of Technology (SUT) - Prof. Somayyeh Koohi and Prof. Ali Sharifi-Zarchi - Fall 2021(1400-1).
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Updated
Jul 6, 2023 - R
My solutions for the project of "An Intro to Bioinformatics" - Sharif University of Technology (SUT) - Prof. Somayyeh Koohi and Prof. Ali Sharifi-Zarchi - Fall 2021(1400-1).
protGear is a package for protein microarray data processing just before the main analysis.
This R script is used to analyze microarray data acquired by an Agilent SureScan Microarray Scanner.
A pipeline to analyze DNA microarrays by Agilent.
Differential expression analysis using R 🧬
EXIS is an interactive R shiny application for isoform-specific expression analysis.
Differential Gene Analysis of Telomere Microarray Data
MicAff is a genomic data analysis tool. Application made with Shiny. It is used to analyze the data from the microarray experiment. Running on a local server, it allows you to load CEL data, their initial processing and further analysis.
Scripts using GEOquery package to fetch expression matrices and phenotypic data associated with GSE datasets
NOWAC data cleaning package
pmadsim — Prospective Microarray Data Simulation. This is a fork of the madsim R package.
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