mirna
Here are 32 public repositories matching this topic...
command lines tool to annotate miRNAs with a standard mirna/isomir naming
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Apr 22, 2022 - Python
small rna-seq analysis package
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Nov 7, 2022 - Python
isomiR quantification and analysis pipeline
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Sep 12, 2018 - Python
This script implements a Selenium WebDriver to automate the access to miRDB - MicroRNA Target Prediction and Functional Study Database and search for microRNAs targets/seeds present in custom mRNA sequences.
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Aug 1, 2022 - Python
BioSeq2vec: learning deep representation of biological sequences using LSTM Encoder-Decoder
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Aug 2, 2024 - Python
A software to detect genome-wide miRNA-gene enrichment signal.
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Dec 1, 2018 - Python
MirMachine, a command line tool to detect microRNA homologs in genome sequences.
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Feb 23, 2024 - Python
Using RNA-Seq data to improve microRNA target prediction accuracy in animals
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Sep 22, 2020 - Python
Small RNAseq pipeline for paired-end reads
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Feb 23, 2024 - Python
miRNA Discovery Project : simple, easy-to-use, rule-based miRNA candidate discovery with multithread acceleration
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Sep 23, 2017 - Python
TransfoRNA: Navigating the Uncertainties of Small RNA Annotation with an Adaptive Machine Learning Strategy
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Jul 29, 2024 - Python
miRMut - Pipeline for annotation of mutations in miRNA genes
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Dec 9, 2021 - Python
An awesome microRNA-sequencing pipeline
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Apr 10, 2024 - Python
Precursor microRNA Identification Using Deep Convolutional Neural Networks
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Oct 31, 2018 - Python
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Nov 3, 2021 - Python
miRNA-UTR approximate matching algorithms in R/Python/Bash
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Jun 14, 2016 - Python
miRNA subcellular localization
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Jan 12, 2019 - Python
MIREyA is a tool for detection of miRNAs and their gene targets up-regulated through triggering their enhancer in the provided expression dataset
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Jul 8, 2021 - Python
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