A mesh free molecular dynamics (MD) simulation for a fluid in an isothermal container
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Updated
May 31, 2020 - C++
Molecular dynamics allows the atoms and molecules to interact for a fixed period of time, giving a view of the dynamic "evolution" of the system.
A mesh free molecular dynamics (MD) simulation for a fluid in an isothermal container
Modified Embedded Atom Method with Bond Order (MEAM-BO) implementation in LAMMPS
Adjust coordinates and virtual sites for use with various water models in gromacs
A C++ library for the creation of a large dataset of amino acid sidechain perturbations, own PDB Parser code included and some other things related.
Simulation of molecular dynamics for the argon gas.
Reactive molecular dynamics trajectory analysis
The repository contains a C++ code for the quantum molecular dynamics of the hydrogen molecule. The code can be found in the folder CODE, while a discussion of the outputs and the algorithms employed can be found in the REPORT folder.
A real-time MD toy allowing the user to play with both the pairwise and external potentials in a simulation of point particles
Molecular dynamics simulation and visualization of the Lennard-Jones system utilizing CUDA-enabled GPU's
Torch artificial neural network function for plumed2
Data-parallel molecular dynamics simulator for Intel oneAPI.
A simple cluster analysis script for atomic systems
Hoomd plugin to apply a harmonic pinning potential on both translational and rotational motions.
Header-only molecular dynamics microframework
A local stress calculation library for molecular dynamics simulations written in C++11
DL_POLY with MB-pol and energy/stress decomposition
Detect reactions from atomic simulation trajectory
Analysis tools for MD simulation
AutoPas accelerator implementation for LAMMPS