Simulation of molecular dynamics of AB+C type reactions.

Molecular dynamics simulator I programmed in order to understand MD in more detail. Periodic boundary conditions, energy minimizer, thermostat and barostat, aswell as a correct physical scale and forcefields for the noble gasses are already implemented and working well. Future steps will include parallelization of the calculation of particle int…

A simple (PI)MD code for 1D systems

Framework for simulating hybrid particle-field (hPF) dynamics with a part of the simulation box using all-atom molecular dynamics (MD).

Sequential and Parallel Molecular Dynamics

Molecular Dynamic simulation in Fortran using OpenMP

Códigos en Fortran y scripts de Gnuplot que escribí mientras cursé Física computacional (curso de posgrado en Física - FaMAF)

Scripts for analyzing a GROMACS simulation of SPC/E water.

mirrored from https://gitlab.com/ccp5/dl-poly/

Program to perform a liquid simulation in order to obtain the radial distribution function using a Monte Carlo approach. The program can use two different potential types, Lennard-Jones and Stillinger potentials.

Spring

Molecular Dynamic on water using Fortran

Understanding Molecular Simulation 2016, University of Amsterdam. Project K.4 Multiple-Time-Step Integrators from the book "Understanding Molecular Simulation" by Daan Frenkel & Berend Smit

Molecular Dynamics simulation coupled with chemical reactions

Modern Fortran library for processing molecular files.

Repository for the exam in Simulation of Multibody Systems

EIA Project for the Computational Modelling Master's Degree.

Tools for analysing molecular dynamics trajectories based on site occupations

RPMD and rate constant calculations on black-box potential energy surfaces