Get L. pneumophila ST from long-read or hybrid assemblies.
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Updated
Jul 18, 2023 - Python
Get L. pneumophila ST from long-read or hybrid assemblies.
Build highly accurate transcripts from long-read RNA data
CatMOD is a CatBoost-based feature-concatenation model for RNA modification recognition from ONT DRS.
Clair3-RNA - a long-read small variant caller for RNA sequencing data
Wrapper to read fast5 and pod5 files.
Wrapper to read fast5, slow5, blow5 and pod5 files.
FLAME: Full Length Adjecency Matrix Enumeration - is a module that allows for the analysis of ONT Nanopore RNA long-read sequencing data.
ClairS-TO - a deep-learning method for tumor-only somatic variant calling
Mapping-based Genome Size Estimation (MGSE) performs an estimation of a genome size based on a read mapping to an existing genome sequence assembly.
ClairS - a deep-learning method for long-read somatic small variant calling
CLI tool for flexible and fast adaptive sampling on ONT sequencers
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