Lima - Demultiplex Barcoded PacBio Samples
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Updated
Dec 18, 2023 - R
Lima - Demultiplex Barcoded PacBio Samples
A pacbio barcode clustering and barseq pipeline
Public repository of data and analyses from Dirks and Jackson (2020), "Community structure of Arbuscular Mycorrhizal Fungi in Soils of Switchgrass Harvested for Bioenergy", Applied and Environmental Microbiology 86 (19)
Inter-sample analysis of SQANTI classifications
Snakemake workflow for SM-PATseq
pattern detection in R using the stringR package for the pacbio and the oxford nanopore reads
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