Foldseek enables fast and sensitive comparisons of large structure sets.
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Updated
May 23, 2024 - C
Foldseek enables fast and sensitive comparisons of large structure sets.
Generate frequency tables used by Modeller and IMP.
Remote protein homology detection suite.
Inference of couplings in proteins and RNAs from sequence variation
Implementation of the Particle Swarm Optiomization algorithm for the Protein Structure Prediction problem using 2D HP model. This approach includes the pull move heuristic for local search.
Implementation of the Ant Colony Optimization meta-heuristic for the Protein Structure Prediction problem using 2D HP model. This approach includes the pull move heuristic for local search.
Source code and files for structural network analysis of Cas9 RNP
De novo protein structure prediction using iteratively predicted structural constraints
Deep ResNet-based protein contact prediction
ContextShapes Algorithm for rigid-body protein shape matching and docking
defines the interface region of a protein complex making possible to calculate the i_rmsd between native and predicted structures following the CAPRI criteria
implementing PDB to FASTA file format conversion in multiple languages
Elastic Network Contact Model (coarse-grained Normal Mode Analysis software)
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