Is a Django Python web application to download PubMed data into a Microsoft Excel spreadsheet and XML files.
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Updated
Jul 28, 2024 - HTML
Is a Django Python web application to download PubMed data into a Microsoft Excel spreadsheet and XML files.
Estudio del carácter patogénico de variantes humanas mediante deep learning. Fine-tuning de BERT para la representación de enfermedades: un método de aprendizaje sobre datasets de textos biomédicos.
Tools to create a clinical knowledge graph from biomedical literature. Includes wrappers for NCBI Eutils, cTakes annotator and Neo4J
CureHunter XSL transformer for multithreaded conversion/transformation of a directory of XML files.
Notebooks for fine-tuning and running of PubMedBERT-based classification models, used in the ANDDigest tool
Paper Peek is a project based on Natural Language Processing which helps the medical professional to read abstracts from the Randomized controlled trials (RCTs) abstracts into sub sections such as Background, Objective etc.
This repository automatically requests and extracts abstract from PubMed.
BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).
Unsupervised Discovery Of Trends In Biomedical Research Based On The PubMed Baseline Repository
BioMedical Language Processing with ELECTRA
A command-line tool to fetch and save data from articles available on PubMed using pubmed-lookup
CLinical Information Retrieval Evaluation Collection
This repository contains files and information about step 2 of Kaphta Architecture: Information Extraction, using the R language.
A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework
It provides a method of how to fetch articles along with their features and text from PubMed API.
Analyzed PubMed Text abstracts using NLP and Topic Modeling techniques
Clustering PubMed Abstracts using K-Means Algorithm
Text miner for PubMed abstracts
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