A research compendium: Transcriptional regulation of autophagy during adipocyte differentiation
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Updated
Sep 7, 2020 - R
A research compendium: Transcriptional regulation of autophagy during adipocyte differentiation
Code for the Adipocyte paper (Modeling the gene expression and the DNA-binding in the 3T3-L1 differentiating adipocytes)
Code for the BMC Genomics paper (Integrating binding and expression data to predict transcription factors combined function)
A template repository for a research compendium using R and the {targets} package.
Code and data for Visser et al. (2020). Comorbidities between specific learning disorders and psychopathology in elementary school children in Germany. Frontiers in Psychiatry.
Research Compendium for the preprint DOI: https://doi.org/10.1101/2022.06.30.498314
Code for the PeerJ paper (cRegulome: an R package for accessing microRNA and transcription factor-gene expression correlations in cancer)
Project describing frog translocations to reestablish populations in the presence of infectious disease
Code for the Adipocyte paper (Curated gene expression dataset of differentiating 3T3-L1 adipocytes under pharmacological and genetic perturbations)
A research compendium for: “Using visual encounter data to improve capture-recapture abundance estimates”
Code for the (unpublished) paper ( Regulation of autophagy in response to oxidative stress)
🌴 🍂 Pre-dispersal seed predation of Jacaranda copaia on BCI
A template for repositories that accompany a publication and encapsulate the analysis component.
🍑 🐛 Code from Jackson et al. (2022) Pre-dispersal seed predation could help explain premature fruit drop in a tropical forest.
Code for the book chapter (Anti-cancer effect of RKIP via modulating autophagy during metastasis)
🍈 🏝️ Spatial patterns of premature fruit drop on BCI
Code for the Cells paper (Transcriptional Regulation of Autophagy Genes via Stage-Specific Activation of CEBPB and PPARG during Adipogenesis)
Data and Analysis of Lewerentz et al 2021: Depth diversity gradients of macrophytes: shape, drivers and recent shifts
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