Scripts to synchronize Singularity images to a CVMFS repository.
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Updated
May 14, 2024 - Python
Scripts to synchronize Singularity images to a CVMFS repository.
Simplify HPC and Batch workloads on Azure
Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Adasme et al. (2021), https://doi.org/10.1093/nar/gkab294
Container-native task automation engine.
streamlined singularity python client (spython) for singularity
Local filesystem registry for containers (intended for HPC) using Lmod or Environment Modules. Works for users and admins.
Singularity Global Client for container management
orchestration for singularity containers (under development)
software to generate a reproducible container with a battery of experiments
Snakemake pipelines for nanopore sequencing data archiving and processing
An introduction to singularity
scientific filesystem: a filesystem organization for scientific software and metadata
Generic human DNA variant annotation pipeline
Singularity recipe for AlphaFold
A comprehensive quality-control and quantification RNA-seq pipeline
Clinical Whole Genome and Exome Sequencing Pipeline
The Zavolab Automated RNA-seq Pipeline
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