Multi-species size-based ecological modelling in R
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Updated
Apr 12, 2024 - R
Multi-species size-based ecological modelling in R
Scalable joint species distribution modeling
Simulate data and fit 2-species occupancy model à la Rota et al. (2016) w/ Unmarked
Development version of phaseR, an R package for phase plane analysis of one- and two-dimensional autonomous ODE systems
Explicit Interaction Community Models
Brodie J.E., Helmy O., Mohd-Azlan J., Granados A., Bernard H., Giordano A., and Zipkin E.F. 2018. Models for assessing local-scale co-abundance of animal species while accounting for differential detectability and varied responses to the environment. Biotropica. 50: 5-15.
Supplement to the paper Queiroz et al. (2020, Biotropica).
A updatet code for the paper Bastazini et al. 2017
Repository of the article: A synthesis of animal-mediated seed dispersal of palms reveals distinct biogeographic differences in species interactions
Host plant-aphid association data from M.E. Palmer's (1952) "Aphids of the Rocky Mountain Region"
Supplementary information from Pacelhe et al. 2019 (Biotropica)
Shiny app to help identify pairwise species interactions occurrences in literature
Meet nestor, an R package for the variational inference of species interaction networks from abundance data, while accounting for missing actors.
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