Bioinformatic analysis of RNA-Seq, WGBS, and Hi-C in Arabidopsis
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Updated
Jan 6, 2020 - R
Bioinformatic analysis of RNA-Seq, WGBS, and Hi-C in Arabidopsis
Annotation helper tool for the manual curation of transposable element consensus sequences
This repository contains the code used in the Master's Thesis "Transcriptomic keys of aging" from the Master's Degree in Biomedicine and Molecular Oncology from the University of Oviedo
GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered polymorphisms in read sets using genome-graphs.
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