rails g scaffold Alignment sequence:string flags:integer reference:string chromosome:string position:integer cigar:string --no-stylesheets --no-helper --no-javascripts --no-jbuilder --no-assets
For some reason, it appears that bundle exec autotest uses the develpoment environment? Create and update controller tests fail due to CSRF verification failure. Need to use RAILS_ENV=test bundle exec autotest
Using my modified bowtie2 2.2.9 which outputs = or X rather than just the ambiguous M.
See app/views/statics/index.html.erb for all the details.