simed

Simulate Degenerate Text

cargo install --path .

Usage

Print the help text

simed -h

Generate Degenerate Text of width 100

simed 100 > x.eds

Options

    -d, --percent-degenerate <d>
            percentage of degenerate loci [default: 10]

    -h, --help
            Print help information

    -l, --max-length <max_length>
            max length of a degenerate segment [default: 1]

    -s, --max-variants <max_variants>
            Maximum number of variants in a degenerate position [default: 2]

    -V, --version
            Print version information