Pinned repositories

  1. courses

    Notes for classes/lectures

    HTML 11 14

  2. aws-snippets

    Useful snippets for interacting with AWS via Python/boto3

    Python 1 1

  3. container-images

    A library of research-specific Docker container images

  4. cloud-templates

    Public CloudFormation / Heat templates for base AWS / OpenStack deployments

  5. rc-website

    Public website for UVA School of Medicine Research Computing

    JavaScript 3 1

  • Public website for UVA School of Medicine Research Computing

    JavaScript 3 1 Updated Oct 19, 2018
  • The iTHRIV is a Transnational Medicine initiative aimed at helping researchers, clinicians and the community locate available resources to improve the health care system.

    TypeScript 1 MIT Updated Oct 19, 2018
  • Material for Introduction to Biopython workshop

    Jupyter Notebook GPL-3.0 Updated Oct 18, 2018
  • Shiny App for Microbiome Data Exploration

    R GPL-3.0 Updated Oct 12, 2018
  • Create a standardized format for reference genome files and indexes

    Python 2 Updated Oct 12, 2018
  • 28 Updated Oct 11, 2018
  • Combining MARGE(http://cistrome.org/MARGE/index.html) and BART(http://faculty.virginia.edu/zanglab/bart/) to predict TF binding.

    Python 1 Updated Oct 11, 2018
  • Jupyter Notebook Updated Oct 7, 2018
  • R shiny for microbiome project

    R Updated Oct 5, 2018
  • Mobile friendly web app to sign up for local workshops hosted at the University of Virginia.

    Python MIT Updated Sep 19, 2018
  • Binder repo for python data visualization

    Jupyter Notebook GPL-3.0 Updated Aug 28, 2018
  • Workshop material for introduction to databases

    Updated Aug 28, 2018
  • Workshop material for Introduction to Cloud Computing

    Updated Aug 28, 2018
  • Command Line workshop material

    Updated Aug 28, 2018
  • Notes for classes/lectures

    HTML 11 14 Updated Aug 9, 2018
  • Python 29 Updated Aug 7, 2018
  • Workflows for genome analysis using GATK4 BestPractices on Rivanna

    wdl Updated May 24, 2018
  • A simple project for a Dockerfile to grab and build.

    Python Updated Apr 30, 2018
  • R Updated Apr 2, 2018
  • A brief introduction to version control via git and GitHub

    2 23 Updated Feb 22, 2018
  • Useful snippets for interacting with AWS via Python/boto3

    Python 1 1 Updated Dec 11, 2017
  • Public CloudFormation / Heat templates for base AWS / OpenStack deployments

    Apache-2.0 Updated Oct 13, 2017
  • Tools for managing cold archives in AWS Glacier

    Updated Oct 5, 2017
  • A library of research-specific Docker container images

    Updated Sep 15, 2017
  • Cloud / Data Workshop for DSI - August 2017

    R 4 Updated Aug 24, 2017
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