This repository contains a recipe for a Docker iamge, build around RDDpred version 1.1 with adjustments in favour of this container.
This software is part of the following publication:
Kim, M. S., Hur, B., & Kim, S. (2016, January). RDDpred: a condition-specific RNA-editing prediction model from RNA-seq data. In BMC genomics (Vol. 17, No. 1, p. 5). BioMed Central.
Please refer to the authors of the software for any questions: http://epigenomics.snu.ac.kr/RDDpred/.
Test whether it's working with the following commands:
git clone https://github.com/vibbits/RDDpred.git
docker build -t rddpred-github:1.1.4 .
docker run rddpred-github:1.1.4 python RDDpred.py
Original RDDpred.py file = RDDpred.py.org
Original README file = README-org