This script translates the APOE ortholog sequences from nucleotide sequences to amino acid sequences using BioPython. Creates a fasta file called apoe_aa.fasta that contains the translated orthologs.
This script uses Clustal Omega to align the translated APOE orthologs from apoe_aa.fatsa. Creates a fasta file called aligned_apoe.fasta that contains the aligned orthologs.
- python3
- biopython
- clustalo
Victoria R. Liebsch
5 March 2022