Repository for BioFors (Biomedical Image Forensics) Dataset and MONet (Model for duplication detection in biomedical images)
Download BioFors.
Sample commands:
Run inference using MONet pretrained model on BioFors test set
python monet_test.py --model-path model_weights/monet_regular_margin_model.pt --image-categories FACS Macroscopy
Evaluate predictions on EDD task
python eval/eval_EDD.py --image-categories FACS Macroscopy
If you found out work useful, please cite:
@inproceedings{sabir2021biofors,
title={Biofors: A large biomedical image forensics dataset},
author={Sabir, Ekraam and Nandi, Soumyaroop and Abd-Almageed, Wael and Natarajan, Prem},
booktitle={Proceedings of the IEEE/CVF International Conference on Computer Vision},
pages={10963--10973},
year={2021}
}
@inproceedings{sabir2022monet,
title={MONet: Multi-Scale Overlap Network for Duplication Detection in Biomedical Images},
author={Sabir, Ekraam and Nandi, Soumyaroop and AbdAlmageed, Wael and Natarajan, Prem},
booktitle={2022 IEEE International Conference on Image Processing (ICIP)},
pages={3793--3797},
year={2022},
organization={IEEE}
}