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Benchmarking extra time required for scanning all mapping with supple loci #7

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yenyilin opened this issue Jan 12, 2018 · 0 comments
Open

Benchmarking extra time required for scanning all mapping with supple loci #7

yenyilin opened this issue Jan 12, 2018 · 0 comments
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We need to add a two-pass mode in scanning sam/bam file and store all mapping records with supple mapping in memory to supply the information for hard-clipping reads in the second round which makes actual partition information.
@yenyilin yenyilin self-assigned this Jan 12, 2018
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