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a pytorch version for GREMLIN, used to predict the protein contacts by coevolution method.

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GREMLIN_PYTORCH

a pytorch version for GREMLIN, used to predict the protein contacts by coevolution method.

pytorch 1 is a bare_bare minimum version, you can treat this as a pytorch tutorial. pytorch 2 version has some classes, you can also treat this as a pytorch tutorial but can learn advanced structure.

Alternative implementations C++ https://github.com/sokrypton/GREMLIN_CPP

Python/Tensorflow https://github.com/sokrypton/GREMLIN_CPP/blob/master/GREMLIN_TF.ipynb

MATLAB https://github.com/sokrypton/GREMLIN

CUDA https://github.com/soedinglab/CCMpred

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a pytorch version for GREMLIN, used to predict the protein contacts by coevolution method.

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