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1. psupertime psupertime Public

   psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels

   R 38 13

2. SampleQC SampleQC Public

   Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data

   R 36 3

3. TreeTop TreeTop Public

   TreeTop is an algorithm for single-cell data analysis to identify and assess statistical significance of branch points in biological processes with possibly multi-level branching hierarchies. We de…

   MATLAB 3 2

4. psupplementary psupplementary Public

   Supplementary data and analyses for the package psupertime

   R 3

5. TreeTop_data TreeTop_data Public

   Example data for package TreeTop

   1

6. muscat muscat Public

   Forked from HelenaLC/muscat

   Multi-sample multi-group scRNA-seq analysis tools

   R 1