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Package to compute trap-assisted electron and hole capture in semiconducting compounds

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License: MIT made-with-julia Build Status codecov DOI DOI

A set of codes to compute carrier capture and recombination rates in semiconducting compounds. This topic has a rich history starting from the work by Huang and Rhys. Our implementation was inspired by the approach (and FORTRAN code) employed by Alkauskas and coworkers, but has been adapted to also describe anharmonic potential energy surfaces.

Installation

The codes are written in Julia, while the scripts and Jupyter Notebooks also contain Python and use pymatgen and pawpyseed (tested on Scientific Linux 7 and Linux Mint 18), which are assumed to be installed. The Brooglie package is used to solve the time-independent Schrödinger equation.

Install the package by:

julia> using Pkg

julia> Pkg.add(PackageSpec(url="https://github.com/WMD-group/CarrierCapture.jl.git"))

To run the unit tests for the package, use the Pkg.test function.

julia> Pkg.test("CarrierCapture")

Development

The project is hosted on Github. Please use the issue tracker for feature requests, bug reports and more general questions. If you would like to contribute, please do so via a pull request.

Usage

A typical workflow will consist of several steps, implemented in a series of short programs, which may be run from the command line. Input for the calculations is provided in input.yaml.

  1. Prepare a sequence of atomic structure models with displacements that interpolate between two defect configurations (e.g. a site vacancy in charge states q=0 and q=+1). Run single-point energy calculations on these structures, and extract the total energies. Scripts for preprocessing may be found in script.

  2. Find a best fit for the energy calculations of the deformed structures (potential) to generate potential energy surfaces (PES). Solve the 1D Schrödinger equation for each PES to obtain their phonon (nuclear) wavefunctions.

  3. Construct configuration coordinate (conf_coord) to calculate the wavefunction overlap between each PES, which forms part of the temperature-dependent capture coefficient.

schematics

The command-line interface (GetPotential.jl and GetRate.jl) is depreciated. Use Jupyter Notebook examples as a template.

Examples

The following examples are provided to illustrate some of the applications of these codes. The input data has been generated from density functional theory (DFT) using VASP, but the framework can easily be adapted to accept output from other electronic structure calculators.

Theory

The electronic matrix element frequently causes feelings of discomfort (Stoneham, 1981)

The capture of electrons or holes by point defects in a crystalline materials requires the consideration of a number of factors including the coupling between electronic and vibrational degrees of freedom. Many theories and approximations have been developed to describe the reaction kinetics.

The capture coefficient between an initial and final state for this computational set up is given by (eq. 22 in Alkauskas and coworkers):

Here, V is the volume of the supercell, Wif is the electron-phonon overlap and ξim and ξfn describe the wavefunctions of the mth and nth phonons in the initial i and final f states. The final delta-function term serves to conserve energy and in practice is replaced by a smearing Gaussian of finite width σ.

User Warning

The values produced by this type of analysis procedure are sensitive to the quality of the input. We expect that most input data will have been generated by DFT where the basis set, k-points, and ionic forces have been carefully converged. In addition, the alignment of energy surfaces for defects in different charge states requires appropriate finite-size corrections (e.g. see Freysoldt and coworkers).

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