TEMA-R-CODES extra contents

##CODES

• SMOTE.R
• undersampling.R
• SVM comparison.R
• knnweighted_comparison.R
• experiment.R
• experiment_overs.R
• experiment_under.R
• best_2dcombination.R
• extract_legend.R
• forward.R
• hillclimbing.R
• backwards.R
• forward_normal.R
• hillclimbing_normal.R
• backwards_normal.R
• results_normal.R
• results_overs.R
• results_under.R
• results_normal_conf.R
• results_overs_conf.R
• results_under_conf.R
• main.R
• matrix_best_inclu_nondefi.R
• Bhattacharyya distance.R
• min-max_normalization.R
• combs_with_non_defining.R
• PLOT1&2.R
• PLOT3.R
• PLOT4.R
• PLOT5.R
• PLOT6.R
• PLOT7.R

##Data

table_it_cv.RData contains the following LOOCV lists:

• without balance aid, non-cognitive, non-defining and all features
• with undersampling, non-cognitive, non-defining and all features
• with oversampling (SMOTE), non-cognitive, non-defining and all features

lista.RData contains the following 10-fold CV lists:

• without balance aid, best combinations with 2,...,6 for non-defining features
• with undersampling, best combinations with 2,...,6 for non-defining features
• with oversampling (SMOTE), best combinations with 2,...,6 for non-defining features

Dataset ADNI

The ADNI (Alzheimer Disease Neuroimaging Initiative) do not allow data publishing/distribution anywhere other than the site (adni.loni.usc.edu).