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1. immunopeptidomics immunopeptidomics Public

   Data parsing, analysis, and visualization scripts for HLA ligand datasets

   Python

2. PresentER-ML PresentER-ML Public

   Prediction of TCR off-targets from PresentER screen data

   Python

3. peptideMHCdocking peptideMHCdocking Public

   Peptide-MHC docking using Rosetta

   Python

4. antigenReceptorRepertoires antigenReceptorRepertoires Public

   Analysis of bulk and single-cell TCR and BCR libraries

   Python

5. SEAKERsim SEAKERsim Public

   Modeling the dynamics of an engineered T cell platform

   Jupyter Notebook