update #25
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update #25
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…ge (#509) * use median for point-estimate in bayesian estimation instead of average * add paired samples parameter to FlashLFQ engine * assign PairedSamples variable in constructor
* Variant identification and representation fixes * codacy * codacy..again * make code clearer, add comments * more comments * last comment * spelling error in comment fixed * Test if the original AA is modified if the seqeunce varation will go as expected
* SetIsolationMz * update unit test
* crash fix * add Test
* added IsVariantPeptide bool code to peptideWithSetModifications * addition of pyrolysine * repair broken test * fix spelling pyrrolysine * RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
* added IsVariantPeptide bool code to peptideWithSetModifications * addition of pyrolysine * repair broken test * fix spelling pyrrolysine * RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR * Add separation type enum, which will be used to inform which kind of calculation to use in PEP in metamorpheus
* memory-efficient fragmentation * hopefully final commit before review * remove an unnecessary lock * changes in response to review * grammar
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