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1. unfasta unfasta Public

   Command-line pipes and filters for genomic sequence data

   Shell 1

2. taxo taxo Public

   Command line NCBI taxonomy browser

   Shell 1

3. kcri-tz/kcri-cge-bap kcri-tz/kcri-cge-bap Public

   KCRI CGE Bacterial Analysis Pipeline

   Python 6 6

4. gene-paths gene-paths Public

   Determine gene order and orientation in assemblies

   C++

5. kcst kcst Public

   K-mer counting sequence typer

   C++ 1

6. picoline picoline Public

   Simplistic workflow and job control for on-machine pipelines

   Python