v1.3.0

1.3.0 (2024-11-29)

Features

• coverm: mark individual files as temporary (25e4c86)
• coverm: rearrange files again (8058735)
• coverm: remove functions (015c4f8)
• htseq: do not compress output and make it temp (6d9159c)
• remove r packages, update and pin environments (5785f85)
• restructure bowtie and use csvtk to join files (acc9ddf)
• subread: introduce middle step (365d41e)
• subread: quantify trnas and rrnas too (d459a74)
• subread: solve dependency; add reports to multiqc (2b7b9a3)
• substitute custom r script for csvtk (0cacb96)

Bug Fixes

• bowtie2: small index (7f17e44)
• give multiqc the correct files (1f35182)
• htseq: remove mention to file (53465d9)
• remodel to take the gff from dram (7a5d362)