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librelion_lib.so error #10

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bforsbe opened this issue Jun 22, 2016 · 1 comment
Closed

librelion_lib.so error #10

bforsbe opened this issue Jun 22, 2016 · 1 comment

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@bforsbe
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bforsbe commented Jun 22, 2016

Originally reported by: Matt Iadanza (Bitbucket: attamatti, GitHub: attamatti)


Everything appeared to go as expected with the install but I'm getting the following error when trying to run:

relion2-beta/build/lib/librelion_lib.so: undefined symbol: _ZN6Fl_BoxC2EiiiiPKc

cmake appeared to run without errors
make ran with only this warning:

configure: WARNING: Ignoring libraries " -lSM -lICE" requested by configure.

system info:
LSB Version: :base-4.0-amd64:base-4.0-noarch:core-4.0-amd64:core-4.0-noarch:graphics-4.0-amd64:graphics-4.0-noarch:printing-4.0-amd64:printing-4.0-noarch
Distributor ID: CentOS
Description: CentOS release 6.7 (Final)
Release: 6.7
Codename: Final


@bforsbe
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bforsbe commented Jun 22, 2016

Original comment by Matt Iadanza (Bitbucket: attamatti, GitHub: attamatti):


Fixed it. The Relion 1.4 libraries were in my $LD_LIBRARY_PATH added the correct one and it fixed it.

@bforsbe bforsbe closed this as completed Jan 26, 2017
biochem-fan pushed a commit that referenced this issue Feb 13, 2019
biochem-fan pushed a commit that referenced this issue Sep 23, 2021
Run jobs with pipeliner in --ccpem version
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