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GPU 2D classification fails to create directory #8

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bforsbe opened this issue Jun 21, 2016 · 3 comments
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GPU 2D classification fails to create directory #8

bforsbe opened this issue Jun 21, 2016 · 3 comments
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@bforsbe
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bforsbe commented Jun 21, 2016

Originally reported by: craigyk (Bitbucket: craigyk, GitHub: craigyk)

When I try to run the GPU version of 2D classification it seems to fail (or not try?) creating the target directory. I have to create it manually and rerun the process.
@bforsbe
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bforsbe commented Jun 21, 2016

Original comment by Sjors Scheres (Bitbucket: scheres, GitHub: scheres):

The relion_refine program never creates a directory. Only the GUI does. Did you use the GUI to launh this job?

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bforsbe commented Jun 21, 2016

Original comment by craigyk (Bitbucket: craigyk, GitHub: craigyk):

No I did not, I was tweaking command line options to submit through our job scheduler... guess I've never noticed this before because the new standard is to use multiple subdirectories.

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bforsbe commented Jun 22, 2016

Original comment by Sjors Scheres (Bitbucket: scheres, GitHub: scheres):

OK, then it is not an issue.

@bforsbe bforsbe closed this as completed Jan 26, 2017
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biochem-fan pushed a commit that referenced this issue Feb 13, 2019
@scheres
Merged in tiff (pull request #8)
0d775c2 
Tiff
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biochem-fan pushed a commit that referenced this issue Sep 23, 2021
@scheres
Merge pull request #8 from 3dem/ccpem-pipeliner-requests
dd63b0e 
Output of reextract and extract helical particles
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