AutoFlowResearch · dmccloskey · Dec 30, 2022 · Aug 30, 2020 · Aug 31, 2020 · Oct 22, 2020
diff --git a/docs/about/parameters.rst b/docs/about/parameters.rst
diff --git a/docs/faq.rst b/docs/faq.rst
diff --git a/docs/guide/guistart.rst → docs/guide/gui.rst b/docs/guide/guistart.rst → docs/guide/gui.rst
@@ -3,7 +3,7 @@
 Using SmartPeak GUI
 ----------------------------------------------------------------------------------------------------------
 
-After successful installation of SmartPeak, on Windows open menu start and browse for relevant icon, you can also find the shortcut on desktop.
+This page describes the graphical user interface (GUI) for working with SmartPeak. SmartPeak GUI provides functionality to facilitate users to get up and running as quickly as possible.  SmartPeak GUI also provides various graphical views and plots to enable faster debugging and configuration of workflows and algorithms.  After installation of SmartPeak on Windows, MacOS, and/or Linux, a shortcut should be available for quickly launching the application.
 
 .. _logs:
 

diff --git a/docs/guide/install.rst b/docs/guide/install.rst
@@ -9,17 +9,17 @@ Example on Ubuntu
 
 .. code-block:: bash
 
-    wget https://github.com/AutoFlowResearch/SmartPeak/releases/download/v1.2.0/SmartPeak-1.2.0-Linux.deb
-    sudo dpkg -i SmartPeak-1.2.0-Linux.deb
+    wget https://github.com/AutoFlowResearch/SmartPeak/releases/download/v1.26.0/SmartPeak-1.26.0-Linux.deb
+    sudo dpkg -i SmartPeak-1.26.0-Linux.deb
     sudo apt-get install -f
 
-User can also use GUI by double clicking on SmartPeak-1.2.0-Linux.deb icon and requesting installation through Ubuntu Software.
+User can also use GUI by double clicking on SmartPeak-1.26.0-Linux.deb icon and requesting installation through Ubuntu Software.
 
 
 Example on Windows
 ------------------
 
-Download latest release for windows, e.g. ``SmartPeak-1.2.0-win64.exe`` and double click on the icon.
+Download latest release for windows, e.g. ``SmartPeak-1.26.0-win64.exe`` and double click on the icon.
 The wizard will guide you through the installation process.
 
 A warning from Windows Defender SmartScreen may appear.

diff --git a/docs/guide/server.rst b/docs/guide/server.rst
@@ -0,0 +1,23 @@
+.. begin_smartpeak_server_usage
+
+Using SmartPeak Server
+----------------------------------------------------------------------------------------------------------
+
+This page describes the remote server for scaling SmartPeak to large and computationally demanding workflows using high performance computing (HPC) resources. 
+The SmartPeak Server utilizes containerization and gRPC to enable users to connect, control, and view a remote session using the SmartPeak GUI.  
+An IT administrator would most likely be required to set-up the remote server on the HPC resources and ensure file transfer and security are in place.
+The SmartPeak team maintains containerized versions of the SmartPeak `CLI <https://hub.docker.com/r/autoflowresearch/smartpeak-cli>`_ and `Server <https://hub.docker.com/r/autoflowresearch/smartpeak-server>`_ on DockerHub that are required for setting up the workers and server, respectively.
+
+.. todo::
+    Describe the functionality of the SmartPeak Server.
+
+.. todo::
+    Describe how to set-up the SmartPeak Server as an IT administrator.
+
+.. todo::
+    Describe how to connect to the SmartPeak Server as a user.
+
+.. warning::
+    SmartPeak Server is currently experimental!
+
+.. end_smartpeak_server_usage
diff --git a/docs/guide/tutorials.rst b/docs/guide/tutorials.rst
@@ -1,13 +1,20 @@
 Tutorials & Demos
 =============================================================================
 
-This section covers a breadth of walkthroughs using different datasets and analytical techniques.
+This section covers a breadth of walkthroughs using different datasets and analytical techniques.  
+All of the datasets used in the tutorials can be found on `GitHub <https://github.com/AutoFlowResearch/SmartPeak/tree/develop/src/examples/data>`_.  
+The datasets and input files can be used as templates for getting started with a new and similar workflow in SmartPeak.
 
+* :doc:`tutorials/Targeted_quantitation_with_LC-MSMS_5500_QTRAP_RapidRIP`.
 
 * :doc:`tutorials/Targeted_quantitation_with_HPLC_data`.
 
 * :doc:`tutorials/Non-targeted_FIA-MS_analysis_with_Thermo_Orbitrap`.
 
+* :doc:`tutorials/Non-targeted_LC-MSMS_DDA_analysis_with_Thermo_Orbitrap`.
+
+* :doc:`tutorials/Non-targeted_LC-MSMS_DIA_analysis`.
+
 * :doc:`tutorials/Targeted_flux_analysis_with_LC-MSMS_Agilent_Lipidomics`.
 
 * :doc:`tutorials/Targeted_flux_analysis_with_GC-MS_SIM_Agilent`.