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1. RandomForestClassifier-Microbiome-Abundance-Data RandomForestClassifier-Microbiome-Abundance-Data Public

   Machine learning meets microbiome data: this project applies a Random Forest classifier with repeated cross-validation to gut microbiome abundance profiles, evaluating ROC/AUC performance and visua…

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2. MicrobiomeAnalysis MicrobiomeAnalysis Public

   A compact, reproducible R Markdown workflow for microbiome analysis of different diversity and abundance metrices using phyloseq, vegan, ggplot2, and DESeq2. The data is synthesized for the project…

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3. MultiomicsAnalysis MultiomicsAnalysis Public

   A multiomics workflow: loading and harmonizing microbiome, metabolite, and transcriptomic data; preparing each layer (CLR, ComBat, z-scores); performing sanity checks, PCA/PCoA/UMAP, and cross-laye…

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