Skip to content

Merge pull request #1 from Bioconductor/workshop-dev #11

Merge pull request #1 from Bioconductor/workshop-dev

Merge pull request #1 from Bioconductor/workshop-dev #11

Workflow file for this run

name: macOS startup
on:
push:
paths-ignore:
- 'doc/**'
- 'lib/galaxy_test/selenium/**'
pull_request:
paths-ignore:
- 'doc/**'
- 'lib/galaxy_test/selenium/**'
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
jobs:
test:
name: Startup test
runs-on: macos-latest
strategy:
fail-fast: false
matrix:
python-version: ['3.7', '3.11']
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v3
with:
path: 'galaxy root'
- uses: actions/setup-node@v3
with:
node-version: '18.12.1'
cache: 'yarn'
cache-dependency-path: 'galaxy root/client/yarn.lock'
- name: Get full Python version
id: full-python-version
shell: bash
run: echo "version=$(python -c 'import sys; print("-".join(str(v) for v in sys.version_info))')" >> $GITHUB_OUTPUT
- name: Cache pip dir
uses: actions/cache@v3
id: pip-cache
with:
path: ~/Library/Caches/pip
key: pip-cache-${{ matrix.python-version }}-${{ hashFiles('galaxy root/requirements.txt') }}
- name: Cache tox env
uses: actions/cache@v3
with:
path: .tox
key: tox-cache-${{ runner.os }}-${{ steps.full-python-version.outputs.version }}-${{ hashFiles('galaxy root/requirements.txt') }}-osx
- name: Install miniconda # use this job to test using Python from a conda environment
uses: conda-incubator/setup-miniconda@v2
with:
activate-environment: ''
- name: Install tox
run: pip install tox
- name: Run tests
run: tox -e first_startup
working-directory: 'galaxy root'
env:
GALAXY_CONDA_PYTHON_VERSION: "${{ matrix.python-version }}"