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  1. Bonelab Bonelab Public

    Collection of utility software from the Bone Imaging Laboratory

    Python 4 2

  2. Bone_Adaptation_as_Level_Set_Motion Bone_Adaptation_as_Level_Set_Motion Public

    Code accommodating the MICCAI-MSKI conference proceeding.

    C++ 1 1

  3. FemurSegmentation FemurSegmentation Public

    Femur segmentation using bone enhancement filtering and multi label graph cuts

    C++ 7 4

  4. HR-pQCT-Segmentation HR-pQCT-Segmentation Public

    Jupyter Notebook 6

  5. Ogo Ogo Public

    Ogo - A library of tools for opportunistic CT, including internal calibration, segmentation, image manipulation and quantitative analysis.

    Python 3 1

  6. tutorial_dl_segmentation tutorial_dl_segmentation Public

    A tutorial for deep learning-based segmentation with PyTorch, PyTorch-Lightning, and the internal bonelab-pytorch-lightning package.

    Jupyter Notebook

Repositories

Showing 10 of 22 repositories
  • bonelab-website Public

    Source code for the Bone Imaging Laboratory website.

    Bonelab/bonelab-website’s past year of commit activity
    HTML 0 BSD-3-Clause 0 0 1 Updated Nov 4, 2024
  • Ogo Public

    Ogo - A library of tools for opportunistic CT, including internal calibration, segmentation, image manipulation and quantitative analysis.

    Bonelab/Ogo’s past year of commit activity
    Python 3 GPL-3.0 1 1 0 Updated Oct 31, 2024
  • HRpQCT-Knee-Seg Public

    this repo contains an installable package for doing automated HR-pQCT knee segmentation

    Bonelab/HRpQCT-Knee-Seg’s past year of commit activity
    Python 0 GPL-3.0 0 1 0 Updated Aug 13, 2024
  • Bonelab/BML-MRI-segmentation’s past year of commit activity
    Python 0 0 0 0 Updated Aug 6, 2024
  • Bonelab/HR-pQCT-Segmentation’s past year of commit activity
    Jupyter Notebook 6 GPL-3.0 0 0 0 Updated Jul 29, 2024
  • Bonelab Public

    Collection of utility software from the Bone Imaging Laboratory

    Bonelab/Bonelab’s past year of commit activity
    Python 4 GPL-3.0 2 4 0 Updated Jul 21, 2024
  • Bonelab/bonelab.github.io’s past year of commit activity
    PHP 1 GPL-3.0 0 1 0 Updated Jul 12, 2024
  • hrpqct-knee-segmentation Public

    Scripts for training and testing models with the goal of automating knee contouring. Depends on `bonelab-pytorch-lightning`

    Bonelab/hrpqct-knee-segmentation’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 0 0 0 Updated May 22, 2024
  • bonelab-pytorch-lightning Public

    Tasks, dataset components, loss functions, and utilities for using pytorch lightning for deep learning with medical image data.

    Bonelab/bonelab-pytorch-lightning’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated May 2, 2024
  • Bonelab/uct-parameter-interdependence’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Apr 19, 2024

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