@CSB-IG

Computational Systems Biology/Integrative Genomics

Computational Systems Biology/Integrative Genomics at National Institute of Genomic Medicine - México

  • Script to convert an adj file (parallel aracne output) to an adjmatrix (upper triangle)

    R Updated Aug 13, 2018
  • Proyecto: Evaluación de la regulación trans en cáncer: un enfoque de biología de sistemas

    R 1 Updated Aug 9, 2018
  • Proyecto: Evaluación de la regulación trans en cáncer: un enfoque de biología de sistemas

    Updated Aug 7, 2018
  • Network Inference and Module Enrichment Analysis, from cancer expression datasets

    R 1 MIT Updated Jul 17, 2018
  • Shell Updated Jul 14, 2018
  • R Updated Jul 11, 2018
  • Tools for Word and String Frequency Counts for Data / Literature Mining in R

    R 1 1 Updated Dec 27, 2017
  • Repurposing pharmacological targets in breast cancer

    R GPL-3.0 Updated Dec 6, 2017
  • CSS GPL-3.0 Updated Nov 29, 2017
  • Pipeline for using aracne in INMEGEN cluster.

    R Updated Jul 6, 2017
  • Pathway Analyses of Apoptosis and Autophagy on Breast Cancer

    R 1 3 GPL-3.0 Updated Jul 6, 2017
  • miRNAseq regulatory networks

    R 2 1 GPL-3.0 Updated Mar 17, 2017
  • Transcription Factor networks from Fantom DB.

    Python GPL-3.0 Updated Jan 19, 2017
  • Distribution plot of MI from adjacency matrices.

    R 1 GPL-3.0 Updated Nov 4, 2016
  • regulation network workflow

    R 2 2 GPL-3.0 4 issues need help Updated Aug 24, 2016
  • Circos plots of rnaseq interactions in tcga brca samples.

    Python GPL-3.0 Updated Jul 21, 2016
  • for all your bibliographic reviewing needs

    Python GPL-3.0 Updated Apr 25, 2016
  • R GPL-3.0 Updated Apr 14, 2016
  • Clustering genes by pathways, expression levels in cancer subtypes.

    Python GPL-3.0 Updated Apr 4, 2016
  • Gene4x

    Forked from lcan88/Gene4x

    Community detection on gene multiplex

    C++ 7 Updated Apr 1, 2016
  • Data mining, mostly medline. Text mining. Network based analyses.

    Shell 7 Updated Mar 29, 2016
  • Transcriptional Master Regulator search in Cancer, a pipeline using MARINa

    R 4 1 GPL-3.0 Updated Jan 26, 2016
  • Breast cancer studies

    Shell 1 2 GPL-3.0 Updated Dec 21, 2015
  • Pathway X-talk Analysis Toolkit

    Python 1 GPL-3.0 Updated Oct 19, 2015
  • Network Analysis Tool Kit

    Python 1 1 GPL-3.0 Updated Aug 20, 2015
  • TCGA breast cancer rnaseq

    R GPL-3.0 Updated Jul 27, 2015
  • Data mining app for fantom.

    Python GPL-3.0 Updated May 8, 2015
  • Tools for NGS data analysis

    Python GPL-3.0 Updated Apr 28, 2015
  • create a networkx.DiGraph object from a KEGG pathway file, with python

    Python 4 Updated Mar 31, 2015
  • R GPL-3.0 Updated Feb 26, 2015