Skip to content

V2.1 #83

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom
Merged
merged 316 commits into from
Feb 28, 2022
Merged

V2.1 #83

merged 316 commits into from
Feb 28, 2022

Conversation

BenjaminMidtvedt
Copy link
Collaborator

Upgrade deeptrack dev version to 2.1

@BenjaminMidtvedt
additional tests
2e4e084
@BenjaminMidtvedt
Add standard normalization
65b1de9
@BenjaminMidtvedt
implement normalizations for tensorflow
f0d935e
@BenjaminMidtvedt
Do not return sample count
8b5c8b4
@BenjaminMidtvedt
Feature: ComplexGaussian
8a84f32
@BenjaminMidtvedt
Add distributed to base class
d17c389
@BenjaminMidtvedt
More robust index handling
5da510c
@BenjaminMidtvedt
Correctly broadcast arithmetic operators
4c2345d
@BenjaminMidtvedt
lower case function
8b46eac
@BenjaminMidtvedt
convert to new syntax
3271af0
@BenjaminMidtvedt
Add dependencies
e55aac3
@BenjaminMidtvedt
introduce benchmarking
97a0f77
@BenjaminMidtvedt
Add config object
07a6816
@BenjaminMidtvedt
Allow init with cupy
d701f4e
@BenjaminMidtvedt
hide _update methods
7e4f573
@BenjaminMidtvedt
Benchmark on gpu vs cpu
c83b6c3
@BenjaminMidtvedt
Implement mie on gpu
8357994
@BenjaminMidtvedt
Implement brightfield on gpu
11e7d4d
@BenjaminMidtvedt
Bigfix Clip
2f8349f
@BenjaminMidtvedt
Coerce inputs before method to ensure all is on same devicc
f8eab70
@BenjaminMidtvedt
Allow gpu
ff5bf50
@BenjaminMidtvedt
Implement conditional features
ad7e241
@BenjaminMidtvedt
Enable memory growth
8e55128
@BenjaminMidtvedt
More tests
4bc81dc
@BenjaminMidtvedt
format input after properties
9a94537
@BenjaminMidtvedt
Merge CappedContinuousGenerator into ContinuousGenerator
3514b92
@BenjaminMidtvedt
Update benchmarks using groups
80835a1
@BenjaminMidtvedt
Include banchmark command
d26b920
@BenjaminMidtvedt
Significant speedup by not copying array
8039663
@BenjaminMidtvedt
Enable benchmark
2d8b0f4
JesusPinedaC and others added 27 commits February 11, 2022 20:05
@JesusPinedaC
Update test_layers.py
8f42c05
@JesusPinedaC
Update layers.py
37ca214
@JesusPinedaC
Create __init__.py
4943023
@JesusPinedaC
Update __init__.py
832c87f
@JesusPinedaC
Update layers.py
247dd74
@JesusPinedaC
Create gnns/models
8fd08bb
@JesusPinedaC
Update layers.py
f0b6d90
@JesusPinedaC
Update __init__.py
adccde6
@JesusPinedaC
Update layers.py
b32aab7
@BenjaminMidtvedt
Merge pull request #94 from softmatterlab/jp/magik
a46275e 
Jp/magik
@BenjaminMidtvedt
fix polarization calculation
a18d762
@BenjaminMidtvedt
Merge branch 'v2.1' of https://github.com/softmatterlab/DeepTrack-2.0 …
5ce316c 
…into v2.1
@BenjaminMidtvedt
Merge branch 'develop' into v2.1
3bcc727
@BenjaminMidtvedt
Delete 04. building_complex_pipelines copy.ipynb
4aa78ae
@BenjaminMidtvedt
Delete 05. making_timeseries.ipynb
fe94d68
@BenjaminMidtvedt
Remove legacy functions
ca29634
@BenjaminMidtvedt
Merge branch 'v2.1' of https://github.com/softmatterlab/DeepTrack-2.0 …
8131f2a 
…into v2.1
@BenjaminMidtvedt
Update README.md
fd9791c
@JesusPinedaC
fix minor bug
4f2030e
@giovannivolpe
Update README.md
e53f0a0
@BenjaminMidtvedt
Update README.md
bb3ab1a
@BenjaminMidtvedt
Update README.md
21e7dc8
@JesusPinedaC
Update logo.png
4cbcd94
@JesusPinedaC
Merge branch 'v2.1' of https://github.com/softmatterlab/DeepTrack-2.0 …
e6d6396 
…into v2.1
@BenjaminMidtvedt
Update README.md
33e9483
@giovannivolpe
Update README.md
e099c7d
@BenjaminMidtvedt
Update generators.py
ee7cebd 
Make generator compatible with 2.0 syntax
@BenjaminMidtvedt BenjaminMidtvedt merged commit 9d4eef0 into develop Feb 28, 2022
@BenjaminMidtvedt BenjaminMidtvedt mentioned this pull request Feb 28, 2022
Merged
@BenjaminMidtvedt BenjaminMidtvedt deleted the v2.1 branch February 28, 2022 15:15
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Reviewers
No reviews
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

Successfully merging this pull request may close these issues.
3 participants
@BenjaminMidtvedt @JesusPinedaC @giovannivolpe