feat(R214): Update NCBI taxonomy browser links to data-hub.

Ecogenomics · Apr 26, 2023 · 5008939 · 5008939
1 parent a5318e1
commit 5008939
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Showing 3 changed files with 5 additions and 5 deletions.
diff --git a/components/genome/GenomeNcbiMetadata.vue b/components/genome/GenomeNcbiMetadata.vue
@@ -267,7 +267,7 @@
               </template>
               <template v-else>
                 <a
-                  :href="`https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=${genomeCard.metadata_ncbi.ncbi_species_taxid}`"
+                  :href="`https://www.ncbi.nlm.nih.gov/data-hub/taxonomy/${genomeCard.metadata_ncbi.ncbi_species_taxid}/`"
                   target="_blank">
                   {{ genomeCard.metadata_ncbi.ncbi_species_taxid }}
                 </a>
@@ -307,7 +307,7 @@
               </template>
               <template v-else>
                 <a
-                  :href="`https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=${genomeCard.metadata_ncbi.ncbi_taxid}`"
+                  :href="`https://www.ncbi.nlm.nih.gov/data-hub/taxonomy/${genomeCard.metadata_ncbi.ncbi_taxid}/`"
                   target="_blank">
                   {{ genomeCard.metadata_ncbi.ncbi_taxid }}
                 </a>

diff --git a/components/genome/GenomeTaxonomicInformation.vue b/components/genome/GenomeTaxonomicInformation.vue
@@ -68,7 +68,7 @@
                 >
                   <template v-if="item.taxonId">
                     <a
-                      :href="`https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=${item.taxonId}`"
+                      :href="`https://www.ncbi.nlm.nih.gov/data-hub/taxonomy/${item.taxonId}/`"
                       target="_blank">
                       {{ item.taxon }}<template v-if="index !== genomeCard.ncbiTaxonomyFiltered.length - 1">;</template>
                     </a>
@@ -134,7 +134,7 @@
                 >
                   <template v-if="item.taxonId">
                     <a
-                      :href="`https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=${item.taxonId}`"
+                      :href="`https://www.ncbi.nlm.nih.gov/data-hub/taxonomy/${item.taxonId}/`"
                       target="_blank">
                       {{ item.taxon }}<template
                       v-if="index !== genomeCard.ncbiTaxonomyUnfiltered.length - 1">;</template>

diff --git a/pages/tree.vue b/pages/tree.vue
@@ -321,7 +321,7 @@
                       <!-- NCBI URL -->
                       <v-btn
                         v-if="showNcbiUrl && item.ncbiTaxId"
-                        :href="`https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=${item.ncbiTaxId}&lvl=3&lin=f&keep=1&srchmode=1&unlock`"
+                        :href="`https://www.ncbi.nlm.nih.gov/data-hub/taxonomy/${item.ncbiTaxId}/`"
                         class="tree-icon mr-1"
                         color="#21568a"
                         depressed