Enable VGNC xrefs for 15 more species #471
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added 3 commits
January 24, 2020 17:14
aotus_nancymaae 37293 carlito_syrichta 1868482 cercocebus_atys 9531 chlorocebus_sabaeus 60711 macaca_fascicularis 9541 macaca_nemestrina 9545 mandrillus_leucophaeus 9568 nomascus_leucogenys 61853 otolemur_garnettii 30611 pan_paniscus 9597 propithecus_coquereli 379532 rhinopithecus_bieti 61621
cebus_capucinus_imitator 1737458 saimiri_boliviensis_boliviensis 39432 Committing these two separately from the other 12 on the off chance three-part names could cause problems - especially in case of Capuchin, which appears as 'Cebus capucinus imitator' on the Ensembl species list but whose database prefix is simply 'cebus_capucinus'.
ameya1981
approved these changes
Jan 27, 2020
ens-bwalts
approved these changes
Jan 27, 2020
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Description
xref_config.ini: enable VGNC xrefs for pig (full gene set) and 14 more new species (cytochrome P450 only)
Use case
As requested by VGNC.
Benefits
More species with VGNC xrefs.
Possible Drawbacks
Increased run time of the xref pipeline. Species from commit 3eb69e9 may or may not prove problematic.
Testing
Have you added/modified unit tests to test the changes?
No.
If so, do the tests pass/fail?
N/A
Have you run the entire test suite and no regression was detected?
No, there aren't any xref-pipeline tests in the test suite.