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Soil temperatures (TP's) in units of Kelvin throughout #328

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weiyuan-jiang and others added 30 commits September 19, 2019 15:31
- Update and rename GEOSldas.HISTORY.md to HISTORY.md
- Update and rename README.GEOSldas_metforcing_and_bcs to README.metforcing_and_bcs.md
- Updates refs to README files
revamp docs
- rewrite README.GEOSldas_history, change name to md
- Update and rename GEOSldas.HISTORY.md to HISTORY.md
- Update and rename README.GEOSldas_metforcing_and_bcs to README.metforcing_and_bcs.md
- Updates refs to README files
Use Icarus-NLv3 boundary conditions (not actually a code change), and change Z0_FORM to 4 (back to veg height lookup values, with simple tree SAI)
* implemented bug fix for get_GEOS() at stream boundaries
(per jkolassa+reichle LDASsa fix, 17 Dec 2019)
…0191220

doc update in prep for v17.9.0-beta.0
Comment out call to check_cat_progns (wrapper for check_catch_progn) in prep for SMAP L4_SM Version 5.
Call was inserted for compatibility of GEOSldas with LDASsa tag used for SMAP L4_SM Version 4 product (Tv4034).
Earlier testing without the call (Tv4033) did not result in crashes of catchment() and yielded slightly drier soil moisture in deserts.

Co-authored-by: Rolf Reichle <54944691+gmao-rreichle@users.noreply.github.com>
MAPL master now points to MAPL v2.0, so we need to repoint `develop` to a v1 tag until all is ready.
Fixes #105. Use a MAPL v1.1 tag for develop
…5-forcing

Added FP-5.25 transition (30 Jan 2020) to "cross-stream" dates
* bring MAPL-2.0 and related Components to GEOSldas

* MAPL-2.0 changes also impacts HISTORY.rc 

* MAPL-2.0 facilitates speed-up in reading tile data

* remove dycore and FMS

* add assimilation for cubed-sphere grid

* add reading forcing from matching cubed-sphere grid when running on cubed-sphere tiles
  
* update LDAS_Forcing.F90 for f525_fp stream boundary

* add export for incr in Assim GridComp

* conform gcc-9.1 (avoid non-logicals in "if" statements) 

* bug fix in select-update_type 9 (abs(deltaT)>0.)

* functionality to create regional (non-global) nc4 vegdyn restart

* bug fix for local mwRTM and time dimension restart

* remove compression of landpert restart files

* replace copy ("cp") with link ("ln") for catparam and mwrtm diagnostic output files

* additional functionality for CATCHMENT_OFFLINE to add extra variables into catch restart files (as needed by GCM)

* added perl lib in preparation for SLES12

Co-authored-by: Weiyuan Jiang and Rolf Reichle
weiyuan-jiang and others added 23 commits August 16, 2020 20:16
Do not build lib in LDAS_App directory
* check ref time before running GEOSldas.x
* use hash_x_indg as x_indg for all grids (avoids earlier repurposing of %i_indg and %j_indg in the case of the cube-sphere grid)
Bug fix: "assert" for snow perturbations should ensure multiplicative type
ESMA_env: tag = v3.0.0, ESMA_cmake: tag = v3.2.0, ESMA_ecbuild: tag = geos/v1.0.5 and MAPL: tag = v2.1.6
1) fix for no tiles in a process.
   - Branch is 0-diff vs develop in the current test suite. 
   - Branch is NOT yet 0-diff between the (old) 1d decomposition (w/ optimization) and the new 2d decomposition functionality.
2) change in absolute path to relative path link in lenkf.j.template
3) one place to set up determine NUM_LDAS_ENSEMBLE entry in lenkf.j from LDAS.rc, replacing the independent, ldas_setup-generated specification in lenkf.j
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7 participants