Update CAST-package.R #9
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HannaMeyer
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Feb 7, 2024
* implement quantitative density layer * document parameter k * comments * just spaces to be in sync with qmd scripts * change QD to LPD * update validation and maxLPD derivation * update plot and print (#2) * add exploreAOA function (#3) * update plot and print * add exploreAOA to package * add message for trainLPD calculation * Dev (#4) * update plot and print * add exploreAOA to package * add message for trainLPD calculation * update explore AOA docs * shift package to description * update exploreAOA docs * update exploreAOA docs and add xmark * update aoa, trainDI and exploreAOA docs * update aoa docs * change order of print.aoa * update aoa.Rd * update DESCRIPTION * Dev (#6) * update plot and print * add exploreAOA to package * add message for trainLPD calculation * update explore AOA docs * shift package to description * update exploreAOA docs * update exploreAOA docs and add xmark * update aoa, trainDI and exploreAOA docs * update aoa docs * change order of print.aoa * update aoa.Rd * update DESCRIPTION * update aoa & trainDI * add trainDat upload options * raster to terra and new layout (#5) * update plot function * update exploreAOA * update exploreAOA * fix error * fix error * fix crs bounding box issue * rm commented code * update plot.aoa & exploreAOA * fix error in trainLPD calculation * fix MD calculation * fix order in print.aoa & message in aoa() * add predictors tif to CAST package * add countryboundaries * add elevation * Dev (#12) * update plot and print * add exploreAOA to package * add message for trainLPD calculation * update explore AOA docs * shift package to description * update exploreAOA docs * update exploreAOA docs and add xmark * update aoa, trainDI and exploreAOA docs * update aoa docs * change order of print.aoa * update aoa.Rd * update DESCRIPTION * update aoa & trainDI * add trainDat upload options * raster to terra and new layout (#5) * update plot function * update exploreAOA * update exploreAOA * fix error * fix error * fix crs bounding box issue * rm commented code * update plot.aoa & exploreAOA * fix error in trainLPD calculation * fix MD calculation * fix order in print.aoa & message in aoa() * add predictors tif to CAST package * add countryboundaries * add elevation * Change `maxLPD` parameter handling & enable `trainLPD` calculation with only training data provided (no model) (#7) * add to maxLPD percantages * update maxLPD parameter validation * enable trainLPD calc with only trainDat (no model) * minor change in maxLPD setting * Add `LPDtoErrormetric` functionality (#8) * add LPDtoErrormetric and adjust plot functions * small change * minor changes on docs and comments * major docs update * update DItoErrormetric and LPDtoErrormetric * New calculation methods for LPD of training data and LPD of prediction data, add DI_LPDtoErrormetric (#9) * update trainLPD implementation in trainDI * add DI_LPDtoErrormetric * update docs * update `toErrormetric` functions * update `...toErrormetric` functions * update CAST docs * change legend position in exploreAOA * update aoa and .knndist - enhance performance of LPD calculation * update trainDI - add progress bars and messages * update DI_LPDtoErrormetric & LPDtoErrormetric to enable multiCV * Feat train di new (#11) * Dev (#6) * update plot and print * add exploreAOA to package * add message for trainLPD calculation * update explore AOA docs * shift package to description * update exploreAOA docs * update exploreAOA docs and add xmark * update aoa, trainDI and exploreAOA docs * update aoa docs * change order of print.aoa * update aoa.Rd * update DESCRIPTION * update aoa & trainDI * add trainDat upload options * raster to terra and new layout (#5) * update plot function * update exploreAOA * update exploreAOA * fix error * fix error * fix crs bounding box issue * rm commented code * update plot.aoa & exploreAOA * fix error in trainLPD calculation * fix MD calculation * fix order in print.aoa & message in aoa() * add predictors tif to CAST package * add countryboundaries * add elevation * update trainLPD implementation in trainDI * add DI_LPDtoErrormetric * update docs * update `toErrormetric` functions * update `...toErrormetric` functions * update CAST docs * change legend position in exploreAOA * update aoa and .knndist - enhance performance of LPD calculation * update trainDI - add progress bars and messages * update DI_LPDtoErrormetric & LPDtoErrormetric to enable multiCV * fix error in LPDtoErrormetric * Dev (#13) * update plot and print * add exploreAOA to package * add message for trainLPD calculation * update explore AOA docs * shift package to description * update exploreAOA docs * update exploreAOA docs and add xmark * update aoa, trainDI and exploreAOA docs * update aoa docs * change order of print.aoa * update aoa.Rd * update DESCRIPTION * update aoa & trainDI * add trainDat upload options * raster to terra and new layout (#5) * update plot function * update exploreAOA * update exploreAOA * fix error * fix error * fix crs bounding box issue * rm commented code * update plot.aoa & exploreAOA * fix error in trainLPD calculation * fix MD calculation * fix order in print.aoa & message in aoa() * add predictors tif to CAST package * add countryboundaries * add elevation * Change `maxLPD` parameter handling & enable `trainLPD` calculation with only training data provided (no model) (#7) * add to maxLPD percantages * update maxLPD parameter validation * enable trainLPD calc with only trainDat (no model) * minor change in maxLPD setting * Add `LPDtoErrormetric` functionality (#8) * add LPDtoErrormetric and adjust plot functions * small change * minor changes on docs and comments * major docs update * update DItoErrormetric and LPDtoErrormetric * New calculation methods for LPD of training data and LPD of prediction data, add DI_LPDtoErrormetric (#9) * update trainLPD implementation in trainDI * add DI_LPDtoErrormetric * update docs * update `toErrormetric` functions * update `...toErrormetric` functions * update CAST docs * change legend position in exploreAOA * update aoa and .knndist - enhance performance of LPD calculation * update trainDI - add progress bars and messages * update DI_LPDtoErrormetric & LPDtoErrormetric to enable multiCV * Feat train di new (#11) * Dev (#6) * update plot and print * add exploreAOA to package * add message for trainLPD calculation * update explore AOA docs * shift package to description * update exploreAOA docs * update exploreAOA docs and add xmark * update aoa, trainDI and exploreAOA docs * update aoa docs * change order of print.aoa * update aoa.Rd * update DESCRIPTION * update aoa & trainDI * add trainDat upload options * raster to terra and new layout (#5) * update plot function * update exploreAOA * update exploreAOA * fix error * fix error * fix crs bounding box issue * rm commented code * update plot.aoa & exploreAOA * fix error in trainLPD calculation * fix MD calculation * fix order in print.aoa & message in aoa() * add predictors tif to CAST package * add countryboundaries * add elevation * update trainLPD implementation in trainDI * add DI_LPDtoErrormetric * update docs * update `toErrormetric` functions * update `...toErrormetric` functions * update CAST docs * change legend position in exploreAOA * update aoa and .knndist - enhance performance of LPD calculation * update trainDI - add progress bars and messages * update DI_LPDtoErrormetric & LPDtoErrormetric to enable multiCV * fix error in LPDtoErrormetric * masking order * adapt default degrees of freedom * add exp and scam exp errormodels * update docs * update docs * Dev (#14) * update plot and print * add exploreAOA to package * add message for trainLPD calculation * update explore AOA docs * shift package to description * update exploreAOA docs * update exploreAOA docs and add xmark * update aoa, trainDI and exploreAOA docs * update aoa docs * change order of print.aoa * update aoa.Rd * update DESCRIPTION * update aoa & trainDI * add trainDat upload options * raster to terra and new layout (#5) * update plot function * update exploreAOA * update exploreAOA * fix error * fix error * fix crs bounding box issue * rm commented code * update plot.aoa & exploreAOA * fix error in trainLPD calculation * fix MD calculation * fix order in print.aoa & message in aoa() * add predictors tif to CAST package * add countryboundaries * add elevation * Change `maxLPD` parameter handling & enable `trainLPD` calculation with only training data provided (no model) (#7) * add to maxLPD percantages * update maxLPD parameter validation * enable trainLPD calc with only trainDat (no model) * minor change in maxLPD setting * Add `LPDtoErrormetric` functionality (#8) * add LPDtoErrormetric and adjust plot functions * small change * minor changes on docs and comments * major docs update * update DItoErrormetric and LPDtoErrormetric * New calculation methods for LPD of training data and LPD of prediction data, add DI_LPDtoErrormetric (#9) * update trainLPD implementation in trainDI * add DI_LPDtoErrormetric * update docs * update `toErrormetric` functions * update `...toErrormetric` functions * update CAST docs * change legend position in exploreAOA * update aoa and .knndist - enhance performance of LPD calculation * update trainDI - add progress bars and messages * update DI_LPDtoErrormetric & LPDtoErrormetric to enable multiCV * Feat train di new (#11) * Dev (#6) * update plot and print * add exploreAOA to package * add message for trainLPD calculation * update explore AOA docs * shift package to description * update exploreAOA docs * update exploreAOA docs and add xmark * update aoa, trainDI and exploreAOA docs * update aoa docs * change order of print.aoa * update aoa.Rd * update DESCRIPTION * update aoa & trainDI * add trainDat upload options * raster to terra and new layout (#5) * update plot function * update exploreAOA * update exploreAOA * fix error * fix error * fix crs bounding box issue * rm commented code * update plot.aoa & exploreAOA * fix error in trainLPD calculation * fix MD calculation * fix order in print.aoa & message in aoa() * add predictors tif to CAST package * add countryboundaries * add elevation * update trainLPD implementation in trainDI * add DI_LPDtoErrormetric * update docs * update `toErrormetric` functions * update `...toErrormetric` functions * update CAST docs * change legend position in exploreAOA * update aoa and .knndist - enhance performance of LPD calculation * update trainDI - add progress bars and messages * update DI_LPDtoErrormetric & LPDtoErrormetric to enable multiCV * fix error in LPDtoErrormetric * masking order * adapt default degrees of freedom * add exp and scam exp errormodels * update docs * update docs * Dev (#15) * update plot and print * add exploreAOA to package * add message for trainLPD calculation * update explore AOA docs * shift package to description * update exploreAOA docs * update exploreAOA docs and add xmark * update aoa, trainDI and exploreAOA docs * update aoa docs * change order of print.aoa * update aoa.Rd * update DESCRIPTION * update aoa & trainDI * add trainDat upload options * raster to terra and new layout (#5) * update plot function * update exploreAOA * update exploreAOA * fix error * fix error * fix crs bounding box issue * rm commented code * update plot.aoa & exploreAOA * fix error in trainLPD calculation * fix MD calculation * fix order in print.aoa & message in aoa() * add predictors tif to CAST package * add countryboundaries * add elevation * Change `maxLPD` parameter handling & enable `trainLPD` calculation with only training data provided (no model) (#7) * add to maxLPD percantages * update maxLPD parameter validation * enable trainLPD calc with only trainDat (no model) * minor change in maxLPD setting * Add `LPDtoErrormetric` functionality (#8) * add LPDtoErrormetric and adjust plot functions * small change * minor changes on docs and comments * major docs update * update DItoErrormetric and LPDtoErrormetric * New calculation methods for LPD of training data and LPD of prediction data, add DI_LPDtoErrormetric (#9) * update trainLPD implementation in trainDI * add DI_LPDtoErrormetric * update docs * update `toErrormetric` functions * update `...toErrormetric` functions * update CAST docs * change legend position in exploreAOA * update aoa and .knndist - enhance performance of LPD calculation * update trainDI - add progress bars and messages * update DI_LPDtoErrormetric & LPDtoErrormetric to enable multiCV * Feat train di new (#11) * Dev (#6) * update plot and print * add exploreAOA to package * add message for trainLPD calculation * update explore AOA docs * shift package to description * update exploreAOA docs * update exploreAOA docs and add xmark * update aoa, trainDI and exploreAOA docs * update aoa docs * change order of print.aoa * update aoa.Rd * update DESCRIPTION * update aoa & trainDI * add trainDat upload options * raster to terra and new layout (#5) * update plot function * update exploreAOA * update exploreAOA * fix error * fix error * fix crs bounding box issue * rm commented code * update plot.aoa & exploreAOA * fix error in trainLPD calculation * fix MD calculation * fix order in print.aoa & message in aoa() * add predictors tif to CAST package * add countryboundaries * add elevation * update trainLPD implementation in trainDI * add DI_LPDtoErrormetric * update docs * update `toErrormetric` functions * update `...toErrormetric` functions * update CAST docs * change legend position in exploreAOA * update aoa and .knndist - enhance performance of LPD calculation * update trainDI - add progress bars and messages * update DI_LPDtoErrormetric & LPDtoErrormetric to enable multiCV * fix error in LPDtoErrormetric * masking order * adapt default degrees of freedom * add exp and scam exp errormodels * update docs * update docs
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