Disable other workflows #1
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| name: MODFLOW 6 continuous integration | |
| on: | |
| push: | |
| paths-ignore: | |
| - '**.md' | |
| - '**.pdf' | |
| - '**.tex' | |
| - '**.jpg' | |
| - '**.jpeg' | |
| - '**.png' | |
| - '**.bbl' | |
| - '**.bib' | |
| - 'doc/**.dat' | |
| - 'doc/**.ipynb' | |
| - 'doc/**.py' | |
| - 'doc/**.sh' | |
| - 'doc/**.xlsx' | |
| - '.hpc/**' | |
| pull_request: | |
| branches: | |
| - master | |
| - develop | |
| paths-ignore: | |
| - '**.md' | |
| - '**.pdf' | |
| - '**.tex' | |
| - '**.jpg' | |
| - '**.jpeg' | |
| - '**.png' | |
| - '**.bbl' | |
| - '**.bib' | |
| - 'doc/**.dat' | |
| - 'doc/**.ipynb' | |
| - 'doc/**.py' | |
| - 'doc/**.sh' | |
| - 'doc/**.xlsx' | |
| - '.hpc/**' | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| lint: | |
| name: Check format | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout modflow6 | |
| uses: actions/checkout@v4 | |
| - uses: prefix-dev/setup-pixi@v0.5.1 | |
| with: | |
| pixi-version: "latest" | |
| - name: Check Fortran source formatting | |
| run: pixi run fortran-format-check | |
| - name: Check MSVS project files | |
| run: pixi run msvs-vfproj-check | |
| - name: Check CITATION.cff | |
| uses: dieghernan/cff-validator@v3 | |
| build: | |
| name: Build | |
| runs-on: ubuntu-22.04 | |
| env: | |
| FC: gfortran | |
| FC_V: 13 | |
| steps: | |
| - name: Checkout modflow6 | |
| uses: actions/checkout@v4 | |
| - name: Setup ${{ env.FC }} ${{ env.FC_V }} | |
| uses: fortran-lang/setup-fortran@v1 | |
| with: | |
| compiler: gcc | |
| version: ${{ env.FC_V }} | |
| - uses: prefix-dev/setup-pixi@v0.5.1 | |
| with: | |
| pixi-version: "latest" | |
| - name: Meson setup | |
| run: pixi run setup-strict | |
| - name: Meson compile | |
| run: pixi run compile-strict | |
| - name: Show build log | |
| if: failure() | |
| run: cat builddir/meson-logs/meson-log.txt | |
| - name: Meson test | |
| run: pixi run test-strict | |
| smoke_test: | |
| name: Smoke test | |
| runs-on: ubuntu-22.04 | |
| defaults: | |
| run: | |
| shell: bash | |
| env: | |
| FC: gfortran | |
| FC_V: 13 | |
| steps: | |
| - name: Checkout modflow6 | |
| uses: actions/checkout@v4 | |
| with: | |
| path: modflow6 | |
| - name: Checkout test-drive | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: fortran-lang/test-drive | |
| path: test-drive | |
| - name: Setup ${{ env.FC }} ${{ env.FC_V }} | |
| uses: fortran-lang/setup-fortran@v1 | |
| with: | |
| compiler: gcc | |
| version: ${{ env.FC_V }} | |
| - uses: prefix-dev/setup-pixi@v0.5.1 | |
| with: | |
| pixi-version: "latest" | |
| - name: Build test-drive | |
| working-directory: test-drive | |
| run: | | |
| pixi run meson setup builddir --prefix=$(pwd) --libdir=lib | |
| pixi run meson install -C builddir | |
| echo "PKG_CONFIG_PATH=$(pwd)/lib/pkgconfig:$PKG_CONFIG_PATH" >> $GITHUB_ENV | |
| - name: Build modflow6 | |
| working-directory: modflow6 | |
| run: | | |
| pixi run meson setup builddir -Ddebug=false --prefix=$(pwd) --libdir=bin | |
| pixi run meson install -C builddir | |
| - name: Show build log | |
| if: failure() | |
| working-directory: modflow6 | |
| run: cat builddir/meson-logs/meson-log.txt | |
| - name: Unit test programs | |
| working-directory: modflow6 | |
| run: pixi run meson test --verbose --no-rebuild -C builddir | |
| - name: Update flopy | |
| working-directory: modflow6 | |
| run: pixi run update-flopy | |
| - name: Get executables | |
| working-directory: modflow6/autotest | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} | |
| run: pixi run pytest -v --durations 0 get_exes.py | |
| - name: Test programs | |
| working-directory: modflow6/autotest | |
| run: | | |
| if [ "${{ github.ref_name }}" == "master" ]; then | |
| pixi run pytest -v -n auto --durations 0 -m "not slow and not regression and not developmode" --keep-failed .failed | |
| else | |
| pixi run pytest -v -n auto --durations 0 -S --keep-failed .failed | |
| fi | |
| - name: Upload failed test output | |
| if: failure() | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: failed-smoke-${{ runner.os }}-${{ env.FC }}-${{ env.FC_V }} | |
| path: modflow6/autotest/.failed | |
| test_gfortran: | |
| name: Test gnu fortran | |
| needs: | |
| - lint | |
| - build | |
| - smoke_test | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ ubuntu-22.04, macos-12, windows-2022 ] | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| env: | |
| FC: gfortran | |
| FC_V: 13 | |
| steps: | |
| - name: Checkout modflow6 | |
| uses: actions/checkout@v4 | |
| with: | |
| path: modflow6 | |
| - name: Checkout modflow6-testmodels | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: MODFLOW-USGS/modflow6-testmodels | |
| path: modflow6-testmodels | |
| - name: Checkout modflow6-examples | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: MODFLOW-USGS/modflow6-examples | |
| path: modflow6-examples | |
| - name: Setup ${{ env.FC }} ${{ env.FC_V }} | |
| uses: fortran-lang/setup-fortran@v1 | |
| with: | |
| compiler: gcc | |
| version: ${{ env.FC_V }} | |
| - name: Setup Micromamba | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: modflow6/environment.yml | |
| create-args: >- | |
| python=3.9 | |
| init-shell: >- | |
| bash | |
| powershell | |
| cache-environment: true | |
| cache-downloads: true | |
| - name: Build modflow6 | |
| working-directory: modflow6 | |
| run: | | |
| meson setup builddir -Ddebug=false --prefix=$(pwd) --libdir=bin | |
| meson install -C builddir | |
| - name: Show build log | |
| if: failure() | |
| working-directory: modflow6 | |
| run: cat builddir/meson-logs/meson-log.txt | |
| - name: Unit test programs | |
| working-directory: modflow6 | |
| run: meson test --verbose --no-rebuild -C builddir | |
| - name: Update flopy | |
| working-directory: modflow6/autotest | |
| run: python update_flopy.py | |
| - name: Get executables | |
| working-directory: modflow6/autotest | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} | |
| run: pytest -v --durations 0 get_exes.py | |
| - name: Test modflow6 | |
| working-directory: modflow6/autotest | |
| env: | |
| REPOS_PATH: ${{ github.workspace }} | |
| run: | | |
| if [ "${{ github.ref_name }}" == "master" ]; then | |
| pytest -v -n auto --durations 0 -m "not large and not developmode" --keep-failed .failed | |
| else | |
| pytest -v -n auto --durations 0 -m "not large" --keep-failed .failed | |
| fi | |
| - name: Upload failed test output | |
| if: failure() | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: failed-${{ matrix.os }}-${{ env.FC }}-${{ env.FC_V }} | |
| path: modflow6/autotest/.failed | |
| - name: Checkout usgslatex | |
| if: runner.os == 'Linux' | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: MODFLOW-USGS/usgslatex | |
| path: usgslatex | |
| - name: Install TeX Live | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt-get update | |
| sudo apt install texlive-science \ | |
| texlive-latex-extra \ | |
| texlive-font-utils \ | |
| texlive-fonts-recommended \ | |
| texlive-fonts-extra | |
| - name: Install USGS LaTeX style files and Univers font | |
| if: runner.os == 'Linux' | |
| working-directory: usgslatex/usgsLaTeX | |
| run: sudo ./install.sh --all-users | |
| - name: Test distribution scripts | |
| working-directory: modflow6/distribution | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} | |
| run: pytest -v --durations 0 | |
| test_intel_fortran: | |
| name: Test intel fortran | |
| needs: | |
| - lint | |
| - build | |
| - smoke_test | |
| runs-on: ${{ matrix.os }} | |
| env: | |
| FC: intel-classic | |
| FC_V: "2021.7" | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-22.04, macos-12, windows-2022] | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: Checkout modflow6 | |
| uses: actions/checkout@v4 | |
| with: | |
| path: modflow6 | |
| - name: Checkout modflow6-testmodels | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: MODFLOW-USGS/modflow6-testmodels | |
| path: modflow6-testmodels | |
| - name: Checkout modflow6-examples | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: MODFLOW-USGS/modflow6-examples | |
| path: modflow6-examples | |
| - name: Setup Micromamba | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: modflow6/environment.yml | |
| init-shell: >- | |
| bash | |
| powershell | |
| cache-environment: true | |
| cache-downloads: true | |
| - name: Setup ${{ env.FC }} ${{ env.FC_V }} | |
| uses: fortran-lang/setup-fortran@v1 | |
| with: | |
| compiler: ${{ env.FC }} | |
| version: ${{ env.FC_V }} | |
| - name: Update version files | |
| working-directory: modflow6/distribution | |
| run: python update_version.py | |
| - name: Build modflow6 | |
| working-directory: modflow6 | |
| run: | | |
| meson setup builddir -Ddebug=false --prefix=$(pwd) --libdir=bin | |
| meson install -C builddir | |
| - name: Show build log | |
| if: failure() | |
| working-directory: modflow6 | |
| run: cat builddir/meson-logs/meson-log.txt | |
| - name: Unit test programs | |
| working-directory: modflow6 | |
| run: meson test --verbose --no-rebuild -C builddir | |
| - name: Update flopy | |
| working-directory: modflow6/autotest | |
| run: python update_flopy.py | |
| - name: Get executables | |
| working-directory: modflow6/autotest | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} | |
| run: pytest -v --durations 0 get_exes.py | |
| - name: Test programs | |
| working-directory: modflow6/autotest | |
| env: | |
| REPOS_PATH: ${{ github.workspace }} | |
| run: | | |
| if [ "${{ github.ref_name }}" == "master" ]; then | |
| pytest -v -n auto --durations 0 -m "not large and not developmode" --keep-failed .failed | |
| else | |
| pytest -v -n auto --durations 0 -m "not large" --keep-failed .failed | |
| fi | |
| - name: Upload failed test output | |
| if: failure() | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: failed-${{ matrix.os }}-${{ env.FC }}-${{ env.FC_V }} | |
| path: modflow6/autotest/.failed | |
| - name: Test scripts | |
| working-directory: modflow6/distribution | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} | |
| run: pytest -v --durations 0 | |
| parallel_test: | |
| name: Parallel testing | |
| needs: | |
| - lint | |
| - build | |
| - smoke_test | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ ubuntu-22.04, macos-12, windows-2022 ] | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: Checkout modflow6 | |
| uses: actions/checkout@v4 | |
| with: | |
| path: modflow6 | |
| - name: Setup Micromamba | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: modflow6/environment.yml | |
| create-args: >- | |
| python=3.9 | |
| init-shell: >- | |
| bash | |
| powershell | |
| cache-environment: true | |
| cache-downloads: true | |
| - name: Test parallel MF6 | |
| if: runner.os != 'Windows' | |
| uses: ./modflow6/.github/actions/test-par | |
| - name: Test parallel MF6 (Windows) | |
| if: runner.os == 'Windows' | |
| uses: ./modflow6/.github/actions/test-par-win | |
| - name: Upload failed test output | |
| if: failure() | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: failed-${{ matrix.os }} | |
| path: modflow6/autotest/.failed |