Release 4 - Version 1

End of IFB399 capstone. First complete release.

Bactopia V3 Data Outputs

Output Data For Bactopia V3

Includes

• 5 Staphylococcus aureus samples
• 4 Lactobacillus Samples
• 2 Escherichia coli samples

Of varying quality/analysis levels.

Release 3 - Alpha

MVP Features Mostly Complete

Features

• Mash Distance Estimation (see README For installation instructions)
• Qualatative Metadata (Location, Host, Isolation Source)
• Functional Network
  • Display similar genomes (with reference to metadata)
  • Filter based on connections or genetic distance

Known Issues

• Functional Network Graph - Save/Zoom buttons not functional
• Metadata - Some metadata names unclear
• Group page not displaying radar graph correctly
• Bactopia V3 -> Output structure slightly different

Release 2 - Alpha

Migration Mostly Operational

Features

• Groups of genomes
• Favourite Genomes
• Search Within Genomes

Known Issues

• Need to migrate to latest Bactopia output structure
• Publicly shared groups
• Advanced search requires input
• Error accessing group with no contents

Release 1 - Alpha

First Release Draft

Features

• Favourites
• Result Page Data Mostly Complete
• Auth
• Database Ops / File System Interactions

Bactopia Workshop Output

Sample data for the application, containing results sourced from Bactopia's workshop examples.