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  1. ClipKIT Public

    a multiple sequence alignment-trimming algorithm for accurate phylogenomic inference

    Python 34 2

  2. PhyKIT Public

    a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies

    Python 33 5

  3. BioKIT Public

    a versatile toolkit for processing and analyzing diverse types of sequence data

    Python 17 6

  4. orthofisher Public

    a broadly applicable tool for automated gene identification and retrieval

    Python 21 1

  5. orthosnap Public

    a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees

    Python 3 1

  6. ggpubfigs Public

    colorblind friendly color palettes and ggplot2 graphic system extensions for publication-quality scientific figures

    R 26 5

580 contributions in the last year

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