Highlights
- Paths. Pick a result and see how you got there. Choose path A and a second path B to compare them: shared jobs are purple, A is blue, B is orange. A panel lists the jobs unique to each path, where they diverge, both end results (resolution, particles) and the first parameters that differ.
- Full tree keeps every job visible and highlights your selection.
- Selection only re-lays out just the chosen paths.
- ★ Latest follows the newest result.
- Pick via the A/B buttons in the sidebar, the Path to… menu, or a job's panel.
- Pan and zoom. Wheel or trackpad scrolls, Ctrl/Cmd+wheel or pinch zooms, drag pans. The view is limited to the tree, so you can't scroll into empty space. 100% returns to actual size, Overview shows the whole tree. SVG/PNG export still writes the full tree.
- Aliases, notes, clearer states. RELION aliases (e.g.
remove_junk_1) are now card and sidebar titles. Notes typed into a job's note.txt appear in the job panel (RELION's own command log is filtered out). Jobs the pipeline references but whose folder is missing are shown as missing; scheduled and running fall back to the pipeline status.
- Readable at a glance. Latest result and best resolution badges, a highlighted main path, and dead-end jobs dimmed. Select jobs became compact ("kept C5 (65%)"). MaskCreate jobs that are used downstream are drawn as small chips on the job that uses them instead of big cards. Edges have arrowheads and route around cards. Larger card text.
- Quieter sidebar. A colour stripe instead of full-colour rows, chronological order, search across alias, notes and state, and A/B pick buttons.
- Deep links and live status.
#Class3D/job004 opens that job. The toolbar shows "updated N s ago · N running". External jobs are labelled by tool (crYOLO, Topaz, …) when recognisable.
New command: reliontree plan
reliontree plan plan.json
