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chg: Install ete4 for testing #239

chg: Install ete4 for testing

chg: Install ete4 for testing #239

Workflow file for this run

name: Python application
on:
push:
branches: [ main, ete4 ]
pull_request:
branches: [ main ]
jobs:
build:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: ["3.8", "3.9", "3.10", "3.11"]
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{matrix.python-version}}
uses: actions/setup-python@v4
with:
python-version: ${{matrix.python-version}}
- name: Install dependencies
run: |
git submodule update --init --recursive
python -m pip install --upgrade pip poetry
- run: echo "POETRY_VERSION=$(poetry --version)" >> $GITHUB_ENV
shell: bash
- run: poetry config installer.modern-installation false
# workaround for bug: https://github.com/microsoft/debugpy/issues/1246
if: ${{ contains(env.POETRY_VERSION, '1.4.1') }}
shell: bash
- name: Run MyPy
run: |
poetry install -vvv --no-cache
git clone https://github.com/etetoolkit/ete.git
pip install -e ete/
poetry run mypy .
- name: Test with pytest
run: |
poetry run pytest --cov=har2tree tests/test.py
poetry run pytest --cov=har2tree tests/simple_test.py
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v3